Detailed Locus Information for CNAG_00822
| Species | Cryptococcus neoformans var. grubii H99 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Gene Annotation | ribosome assembly protein SQT1 | |||||||||
| Gene Symbol | Unknown | |||||||||
| NCBI Protein ID | XP_012046986.1 | |||||||||
| UniProt ID | J9VFV0 | |||||||||
| KEGG Linkout | N/A | |||||||||
| Genome Browser | JBrowse link goes here. Sequence information also available from JBrowse. | |||||||||
| Functional Annotation |
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| Amino Acid Sequence | MSVDEEDQLQDAQLQEDDVVEIVEDDGDIPMDEDDDDNDKYDAEIIIGGPGPGEEDLMMNEEDEGEQRADNSWGVNALHNQQQSIFTISLHPAFPNPPIAISGGEDDAGFIFCPIPADSETSASSSFFSADTFPPTKLTGHTDSVVAAGWSFDGEMVATGGMDGKVIVWQRVKPQESTDEASVDEWKNWSMIQELETGTEITWLQWHPKGNVIAAGCEDATVWLWNLPSGNTLNVLSSHTMTSTAGLFPPPNGRQLLTASLDSSLILWDPRDPNPVWKSSIFMPANSPELDPAEHGITALAVSPNGQIAAVGGSSGKVKLISMAKGDVLATRLVGHAEGESVEALLFVDLLNGAAGGNKGVVLVSAGTDGKAFVWDVATGRVRAELQHDEPITTLAGHPHPQLHLVTTASADSTLKTWDIRTGALIATHTGHMGVVNGVAIAPAREGKVVVSAGDEGVSLIWKV | |||||||||
| AlphaFold Structure with WD40 domains |
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CTR4 Promoter Replacement Construction Design
| Gene Name | Primer Name | Sequence |
|---|---|---|
| SQT1 | B17357 CNAG_00822 5’ flanking region primer L1 | GACATCGCCACTATCGGAAC |
| B17358 CNAG_00822 5’ flanking region primer L2 | GCCACTCGAATCCTGCATGCATTTACAAATGTGCTGGAAC | |
| B17359 CNAG_00822 3’ flanking region primer R1 | CGACAACGACTTCACCAATCATGTCTGTCGACGAGGAAG | |
| B17360 CNAG_00822 3’ flanking region primer R2 | ATGCGTGAAATTGGGACTTG | |
| B17361 CNAG_00822 diagnostic screening primer SO, pairing with B79 | CGGTAAACAGGCCAAGTAGC | |
| B17362 CNAG_00822 Southern blot probe primer PO | ACCCCAACTGTTGTCTGCTC |