B13819 CNAG_06748 diagnostic screening primer SO, pairing with B79
ATGTCAAAACCGGCTCATCT
B17292 CNAG_06748 5’ flanking region primer L1
AGGTGCCCATGTCCAGTATCTT
B17293 CNAG_06748 5’ flanking region primer L2
CACTCGAATCCTGCATGCGTTTGGGAGATGGGGATT
B17294 CNAG_06748 3’ flanking region primer R1
CGACAACGACTTCACCAATCATGGACGCCCTCTTAACA
B17295 CNAG_06748 3’ flanking region primer R2
TAATTCCACGCCATTTTGGT
B23601 CNAG_06748 Southern blot probe primer LP
AAAGGCAAGGGCGGTAGTAC
B23602 CNAG_06748 Southern blot probe primer RP
CTATGAGCTCGGTGTCGGTC
3D AlphaFold-predicted Structure Viewer
WD40 Boundaries: (Domain E-value)
320-357(5.50E-8)
Very high (pLDDT > 90)
High (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
NCBI Protein ID: XP_012047709.1 UniProt ID: J9VFD0 Organism: Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) Gene Symbol: CNAG_06748 Annotation: U3 small nucleolar RNA-associated protein 7 Length: 624 AA Download CIFView on AlphaFold DB
WD40 Domain
: WD40 domains are mapped using HMMsearch (**Parameter used: Sequence-level E-value < 1, Domain-level E-value < 1E-2)
against Pfam PF00400.38 (canonical WD40). If no PF00400.38 hit is found, subclass Pfam domains (e.g., WD40_CDC20-Fz,
WD40_WDHD1_1st, WDR55) are displayed. Each domain-level E-value indicates the statistical significance.
Model Confidence
: The predicted local distance difference test (pLDDT) is a per-residue measure of local confidence. It is scaled
from 0 to 100, with higher scores indicating higher confidence and usually a more accurate prediction.
